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ARL Biotechnology Resource Schedules

    BCF Data Processing & Analysis Facility

         Microarray Analysis Workstations:
    • Ligeti
            MS Windows 2000 Pro CD-RW
      • GeneSpring
      • Affymetrix MAS 5 Suite w/Data Miner
      • DChip
      • softWoRx Tracker
      • TIGR Tools
      • R/Bioconductor


    • Varése
            MS Windows 2000 Pro CD-RW
      • PathwayAssist
      • Affymetrix GCOS Suite
      • DChip
      • TIGR Tools
      • R/Bioconductor


         PC Workstations:
    • Debussy
            MS Windows XP Pro
      • BioEdit
      • BioDesk
      • Chem Bio Office 2008
      • MatLab
      • Microsoft Office 2003


    • Mahler
             MS Windows 2003 Pro; CD-RW,
      • Matlab
      • Office2003
      • BioEdit
      • Enterprise Architect
      • Geneotyper
      • SeqVerter
      • gBench



    BCF Molecular Modeling

         SGI Workstations:
    • Gilmour
            IRIX 6.5.17 Stereo Vision glasses
      • InsightII 2000
        • Biopolymer, Discover, Homology, DelPhi
      • GRASP
      • CSD
      • MolScript
      • Spock
      ...   More Details


    Bio5

         Golf Cart:
    • PickUp
            This resource needs user verification.


    Biological Magnetic Resonance Facilities

         Biomedical Magnetic Resosonance Systems:
    • BIOSPEC 7T
            The BIOSPEC is a 7 Tesla horizontal-bore, multinuclear MRI / MRS system ideal for small animal imaging and
            localized spectroscopy.
      ...   More Details

    • DRX400
            The DRX400 is a 9.4 Tesla multinuclear instrument with micro imaging capabilities. The triple axis gradients
            enable localized spectroscopy, diffusion measurements and microimaging. The system allows 1H, 31P, 13C, 23Na
            and 19F spectroscopy of mammalian cel
      ...   More Details

    • DRX500
            The DRX500 is an 11.7 Tesla multinuclear spectrometer with three independent rf channels and triple axis field
            gradients. Ideal for high resolution spectroscopy of liquid samples and protein and peptide structure
            determination.
      ...   More Details

         MR Data Processing and Analysis:
    • MRIRES
            PC for data processing and analysis

    • MRSGI
            SGI data station for NMR data processing


    Clinical MRI Scanners

         Clinical Research MRI Systems:
    • MR1
            1.5T Signa LX

    • MR2
            1.5T Signa NV/CVi

    • MR3
            3T Signa

         Room:
    • Slot for Future Use
            Ask Dianne Patterson to update this if you decide on a resource.



    Experimental Radiation Shared Service

         Gamma Irradiator:


    Flow Cytometry

         BD FACSAria:
    • FACSAria
            State of the art high speed cell sorter. Three laser lines (488nm, 407nm, 633nm) excite signals that are
            collected in 9 fluorescence channels plus forward and side scatter.


         BD FACScan:
    • FACScan
            This instrument is equipped with a single laser-488nm.Signals are detected in 3 fluorescence channels as well
            as forward and side scatter.


         MAC Analysis Station:
    • CELLQuest Analysis Station
            Schedule time on this calendar to analyze data acquired on the cytometers. BD Cellquest PRO, and FLOWJO are
            available on this workstation



    Genomic Analysis & Technology Core Facilities

         Bioanalyzer:
    • Agilent Bioanalyzer
            This instrument utilizes the lab-on-a-chip technology to accurate qualitate, quantitate, and size DNA, RNA and
            Proteins
      ...   More Details

         Cycler:



    • Biorad iCycler
            This realtime PCR instrument can process up to 96 samples at once and dectect up to four colors in a single
            run



    McKnight Memory and Cognitive Assessment Clinic

         Room:
    • 209B
            Psychology Building, Room 209B Neuropsychological Testing Room

    • 209C
            Psychology Building, Room 209C Neuropsychological Testing Room

    • 209D
            Psychology Building, Room 209D Neuropsychological Testing Room

    • 209E
            Psychology Building, Room 209E Neuropsychological Testing Room




    Proteomic Analysis Laboratory

         Fast Performance Liquid Chromatography (FPLC):
    • AKTA Explorer
            FPLC with capability to purify proteins using ion exchange, reverse phase, gel filtration, and hydrophobic
            interactions chromatographic methods. Flow rates up to 100ml/min are possible.
      ...   More Details

         Resources:
    • Typhoon Scanner
            The Typhoon is a variable-mode imager that produces digital images of fluorescent or chemiluminescent samples.
             We do not scan radioactive samples.
      ...   More Details


    SWAIR Instruments

         Bioluminescence Camera:
    • Bioluminescence Camera
            This technology allows the non-invasive imaging and quantification of cells expressing luciferase proteins.
            The major luciferase used in these studies is from the firefly, phytonis pyralis.
      ...   More Details


    University Spectroscopy and Imaging Facilities

         Microscopes:
    • Leica Diaplan Light Microcope
            Located in Marley 101. 40X-1000X. Upright. Epifluorescence, with DAPI, FITC and Rodamine cubes. Differential
            Interference Contrast for unstained material. Bright field. Data collection by film or digital camera. Image
            analysis software available by Compi
      ...   More Details

    • Currently in use by: knishiucZeiss Confocal Microscope
            Located in Room 410B LSN Laser based system utilizing Argon and HENE visable excitation, and MIRA 900 IR
            2-photon excitation.Upright microscope.


         Microtomes:
    • Leica Ultracut Microtome
            Located in Marley 101. Lieca Ultracut E5 - A modern ultramicrotome capable of cutting thin sections in the
            50-100 nm range required for the Transmission Electron Microscope (TEM) as well as thicker 1-2um plastic
            sections for light microscopy. Unit is cap
      ...   More Details

         Room:
    • Darkroom Printing Facility
            Located in Marley 101. Darkroom (from 35mm to 5"x7" formats): Devere 507 - This facility contains a floor
            standing enlarger capable of 16mm-5x7 format negatives and includes condenser and point light sources.
      ...   More Details

    • Microwave Prep Room
            Located in Marley 101. Contains a Pelco microwave oven that includes venting of hazardous fumes, sample
            temperature control, load temperature control, variable wattage, times and sample vacuum capabilities.
      ...   More Details

         Scanning Electron Microscopes:
    • Hitachi S-2460
            Tungsten thermionic emitter, SE and BSE; Samples as tall as 30mm; Chamber vacuum 0.01-2 Torr in variable
            pressure mode; EDS detection range Boron and higher; full EDS capabilities including spectral imaging,
            qualitative and quantitative analysis.
      ...   More Details

    • Hitachi S-3400
            Tungsten thermionic emitter, Quad Bias; Resolution 30nm at 3KV, 3nm at 30KV; SE and BSE; Samples as tall as
            30mm; Chamber pressure 6 to 270 Pa in variable pressure mode; EDS detection range Boron and higher; full EDS
            capabilities including spectral imagin
      ...   More Details

    • Hitachi S-4500
            1.5 nm resolution, 0.5 - 30 kV accelerating voltage, 3 stage electromagnetic lens, 2 secondary electron
            detectors, 1 backscattered electron detector, x-y-z translation, -5 degrees to + 45 degrees tilt, 360 degree
            rotation (continuous) 50 mm diameter speci
      ...   More Details

    • Hitachi S-4800
            Cold field emission electron gun; Resolution 1nm at 15 KV, 1.4nm at 1KV; Magnification 20X to 800,000X;
            Imaging voltages 100V to 30KV; STEM detector; BSE low and/or high angle; EDS detection range Boron and higher;
            full EDS capabilities including spectral
      ...   More Details

         Spectrometer:

         Transmission Electron Microscopes:
    • CM12 TEM
            Phillips Transmission EM fitted with a high-resolution digital camera. Also has scanning and scanning
            transmission capability for small specimens. Primarily used for Clinical and Medical Research. Located in
            LSN410.


    • Hitachi H-8100
            The Hitachi H8100 is a 200kV conventional TEM with high brightness LaB6 electron source and large
            specimen-tilt (> 30 degrees) capabilities. It offers phase contrast resolution of better than 0.26 (point) and
            0.14 nm (line). It is equipped with small prob
      ...   More Details

    • JEOL 100CX-II TEM
            Located in Marley 101. 100X-200,000X. Good resolution with excellent screen contrast. Film based data
            collection.
      ...   More Details

         X-Ray Detector:



    X-Ray Diffraction Facility

         SGI Workstations:
    • bartok
            graphics computer

    • claude
            SGI Graphics workstation w / stereoviewing capability...   More Details


Resource:
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